Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv3382c

Experiment: 7H9 with Ethionamide 0.1 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Ethionamide 0.1 ug/mL
3,796,656	+		Rv3382c	0.21	+3.7
3,796,791	+		Rv3382c	0.35	+1.5
3,796,792	-		Rv3382c	0.35	+1.1
3,796,792	-		Rv3382c	0.35	-0.2
3,796,792	-		Rv3382c	0.35	-0.2
3,796,897	-		Rv3382c	0.45	-0.2
3,796,897	-		Rv3382c	0.45	-1.4
3,796,958	+		Rv3382c	0.52	+0.4
3,796,959	-		Rv3382c	0.52	+0.1
3,796,959	-		Rv3382c	0.52	-0.2
3,797,286	+		Rv3382c	0.85	+0.7
3,797,286	+		Rv3382c	0.85	-1.3
3,797,286	+		Rv3382c	0.85	-0.6
3,797,286	+		Rv3382c	0.85	+0.5
3,797,287	-		Rv3382c	0.85	+0.8
3,797,287	-		Rv3382c	0.85	+0.9
3,797,287	-		Rv3382c	0.85	-0.1
3,797,343	-				-0.9
3,797,400	+				+0.1
3,797,401	-				-0.0
3,797,455	+				+1.3
3,797,456	-				-0.7
3,797,456	-				-0.0
3,797,630	+		Rv3383c	0.18	+0.4
3,797,631	-		Rv3383c	0.18	-1.5
3,797,700	+		Rv3383c	0.25	-0.8
3,797,701	-		Rv3383c	0.25	-0.3
3,797,915	+		Rv3383c	0.45	-1.0
3,797,973	+		Rv3383c	0.51	-0.0
3,798,050	-		Rv3383c	0.58	+1.1
3,798,118	+		Rv3383c	0.65	+0.3
3,798,216	+		Rv3383c	0.74	-0.1
3,798,217	-		Rv3383c	0.74	+0.4
3,798,217	-		Rv3383c	0.74	-0.1
3,798,278	+		Rv3383c	0.80	-0.9
3,798,419	-				+1.0