Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv2883c

Experiment: 7H9 with Ethionamide 0.1 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Ethionamide 0.1 ug/mL
3,192,375	-				+0.3
3,193,254	-				+0.9
3,193,254	-				-0.5
3,193,339	+				-0.7
3,193,461	-				+0.6
3,193,467	+				+0.1
3,193,468	-				+0.5
3,193,645	-		Rv2884	0.33	-1.1
3,193,849	+		Rv2884	0.60	-0.7
3,193,999	-		Rv2884	0.80	-1.0
3,194,015	+		Rv2884	0.82	-0.6
3,194,015	+		Rv2884	0.82	-0.2
3,194,083	+				+0.2
3,194,084	-				-1.8
3,194,084	-				+0.5
3,194,086	-				-0.5