Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv2175c

Experiment: 7H9 with Ethionamide 0.1 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Ethionamide 0.1 ug/mL
2,437,400	+				-0.7
2,437,450	+				-0.3
2,437,450	+				-3.1
2,437,451	-				-1.2
2,437,451	-				+0.9
2,437,798	+		Rv2175c	0.80	+1.1
2,437,799	-		Rv2175c	0.80	+0.2
2,437,929	+				+0.0
2,437,929	+				+0.3
2,437,929	+				+0.7
2,437,930	-				-1.2
2,437,930	-				-1.4
2,437,995	+				+1.8
2,438,161	+		Rv2176	0.18	+0.3
2,438,267	-		Rv2176	0.27	-0.4
2,438,491	-		Rv2176	0.46	-0.2
2,438,544	+		Rv2176	0.50	+1.1
2,438,545	-		Rv2176	0.50	+0.3
2,438,565	+		Rv2176	0.52	-0.1
2,438,622	+		Rv2176	0.57	-0.9
2,438,865	-		Rv2176	0.77	+1.5