Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv1485

Experiment: 7H9 with Ethionamide 0.1 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Ethionamide 0.1 ug/mL
1,676,304	+		Rv1486c	0.33	-0.3
1,676,304	+		Rv1486c	0.33	-2.5
1,676,305	-		Rv1486c	0.33	-0.5
1,676,305	-		Rv1486c	0.33	-1.3
1,676,387	+		Rv1486c	0.43	+0.9
1,676,387	+		Rv1486c	0.43	-2.2
1,676,388	-		Rv1486c	0.43	-0.2
1,676,420	+		Rv1486c	0.46	+0.4
1,676,421	-		Rv1486c	0.47	-1.0
1,676,421	-		Rv1486c	0.47	+2.1
1,676,762	+		Rv1486c	0.86	-0.7
1,676,896	+				-0.0
1,676,896	+				+0.2
1,676,930	-				-0.7
1,676,935	-				-1.4