Experiment: 7H9 with Ethionamide 0.1 ug/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Rv0630c and Rv0631c overlap by 1 nucleotides Rv0631c and Rv0632c are separated by 276 nucleotides
Rv0630c: Rv0630c - Probable exonuclease V (beta chain) RecB (exodeoxyribonuclease V beta chain)(exodeoxyribonuclease V polypeptide) (chi-specific endonuclease), at 721,729 to 725,013
Rv0630c
Rv0631c: Rv0631c - Probable exonuclease V (gamma chain) RecC (exodeoxyribonuclease V gamma chain)(exodeoxyribonuclease V polypeptide), at 725,013 to 728,306
Rv0631c
Rv0632c: Rv0632c - Probable enoyl-CoA hydratase EchA3 (enoyl hydrase) (unsaturated acyl-CoA hydratase) (crotonase), at 728,583 to 729,278
Rv0632c
Position (kb) 725
726
727
728
729 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 724.097 kb on + strand, within Rv0630c at 724.098 kb on - strand, within Rv0630c at 724.490 kb on + strand, within Rv0630c at 724.535 kb on + strand, within Rv0630c at 724.536 kb on - strand, within Rv0630c at 725.315 kb on - strand at 725.503 kb on + strand, within Rv0631c at 725.852 kb on - strand, within Rv0631c at 726.588 kb on - strand, within Rv0631c at 727.160 kb on - strand, within Rv0631c at 727.160 kb on - strand, within Rv0631c at 727.316 kb on + strand, within Rv0631c at 727.316 kb on + strand, within Rv0631c at 727.861 kb on + strand, within Rv0631c at 727.862 kb on - strand, within Rv0631c at 728.360 kb on - strand at 728.360 kb on - strand at 728.360 kb on - strand at 728.540 kb on + strand at 728.585 kb on - strand at 728.908 kb on + strand, within Rv0632c at 728.909 kb on - strand, within Rv0632c at 729.020 kb on - strand, within Rv0632c at 729.257 kb on + strand at 729.260 kb on - strand at 729.260 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 7H9 with Ethionamide 0.1 ug/mL remove 724,097 + Rv0630c 0.72 -0.1 724,098 - Rv0630c 0.72 -0.3 724,490 + Rv0630c 0.84 -1.6 724,535 + Rv0630c 0.85 -0.8 724,536 - Rv0630c 0.85 -0.2 725,315 - -1.5 725,503 + Rv0631c 0.15 +3.3 725,852 - Rv0631c 0.25 +1.0 726,588 - Rv0631c 0.48 +2.0 727,160 - Rv0631c 0.65 -0.9 727,160 - Rv0631c 0.65 +1.6 727,316 + Rv0631c 0.70 -1.2 727,316 + Rv0631c 0.70 +0.4 727,861 + Rv0631c 0.86 -2.2 727,862 - Rv0631c 0.86 +0.4 728,360 - -1.3 728,360 - -0.7 728,360 - -1.2 728,540 + -0.8 728,585 - +0.0 728,908 + Rv0632c 0.47 +0.3 728,909 - Rv0632c 0.47 +0.1 729,020 - Rv0632c 0.63 +2.0 729,257 + -1.4 729,260 - -0.7 729,260 - -0.6
Or see this region's nucleotide sequence