Experiment: 7H9 with Ethionamide 0.1 ug/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Rv0479c and Rv0480c overlap by 4 nucleotides Rv0480c and Rv0481c are separated by 181 nucleotides Rv0481c and Rv0482 are separated by 26 nucleotides
Rv0479c: Rv0479c - Probable conserved membrane protein, at 567,921 to 568,967
Rv0479c
Rv0480c: Rv0480c - Possible amidohydrolase, at 568,964 to 569,806
Rv0480c
Rv0481c: Rv0481c - Hypothetical protein, at 569,988 to 570,512
Rv0481c
Rv0482: Rv0482 - Probable UDP-N-acetylenolpyruvoylglucosamine reductase MurB (UDP-N-acetylmuramate dehydrogenase), at 570,539 to 571,648
Rv0482
Position (kb) 568
569
570 Strain fitness (log2 ratio) -1
0
1
2 at 568.833 kb on - strand, within Rv0479c at 569.015 kb on + strand at 569.016 kb on - strand at 569.220 kb on + strand, within Rv0480c at 569.220 kb on + strand, within Rv0480c at 569.220 kb on + strand, within Rv0480c at 569.220 kb on + strand, within Rv0480c at 569.221 kb on - strand, within Rv0480c at 569.221 kb on - strand, within Rv0480c at 569.343 kb on + strand, within Rv0480c at 569.367 kb on + strand, within Rv0480c at 569.368 kb on - strand, within Rv0480c at 569.409 kb on - strand, within Rv0480c at 569.437 kb on + strand, within Rv0480c at 569.466 kb on + strand, within Rv0480c at 569.467 kb on - strand, within Rv0480c at 569.737 kb on - strand at 569.774 kb on - strand at 570.039 kb on + strand at 570.048 kb on + strand, within Rv0481c at 570.048 kb on + strand, within Rv0481c at 570.049 kb on - strand, within Rv0481c at 570.049 kb on - strand, within Rv0481c at 570.096 kb on - strand, within Rv0481c at 570.096 kb on - strand, within Rv0481c at 570.096 kb on - strand, within Rv0481c at 570.372 kb on + strand, within Rv0481c at 570.372 kb on + strand, within Rv0481c at 570.373 kb on - strand, within Rv0481c at 570.378 kb on + strand, within Rv0481c at 570.433 kb on + strand, within Rv0481c at 570.433 kb on + strand, within Rv0481c at 570.445 kb on + strand, within Rv0481c at 570.445 kb on + strand, within Rv0481c at 570.446 kb on - strand, within Rv0481c at 570.481 kb on + strand at 570.482 kb on - strand at 570.512 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction 7H9 with Ethionamide 0.1 ug/mL remove 568,833 - Rv0479c 0.87 -1.1 569,015 + +1.3 569,016 - -0.0 569,220 + Rv0480c 0.30 +0.6 569,220 + Rv0480c 0.30 +1.1 569,220 + Rv0480c 0.30 +1.1 569,220 + Rv0480c 0.30 +2.1 569,221 - Rv0480c 0.30 +0.2 569,221 - Rv0480c 0.30 -0.3 569,343 + Rv0480c 0.45 +0.2 569,367 + Rv0480c 0.48 +1.1 569,368 - Rv0480c 0.48 -0.0 569,409 - Rv0480c 0.53 +0.6 569,437 + Rv0480c 0.56 +2.1 569,466 + Rv0480c 0.60 -0.5 569,467 - Rv0480c 0.60 -0.3 569,737 - +0.4 569,774 - +1.1 570,039 + -1.1 570,048 + Rv0481c 0.11 +0.1 570,048 + Rv0481c 0.11 -1.2 570,049 - Rv0481c 0.12 +0.9 570,049 - Rv0481c 0.12 -0.6 570,096 - Rv0481c 0.21 -0.4 570,096 - Rv0481c 0.21 -0.6 570,096 - Rv0481c 0.21 +2.1 570,372 + Rv0481c 0.73 +0.5 570,372 + Rv0481c 0.73 -0.8 570,373 - Rv0481c 0.73 +1.6 570,378 + Rv0481c 0.74 +1.7 570,433 + Rv0481c 0.85 -0.4 570,433 + Rv0481c 0.85 +0.1 570,445 + Rv0481c 0.87 -0.9 570,445 + Rv0481c 0.87 +0.6 570,446 - Rv0481c 0.87 +0.2 570,481 + -0.4 570,482 - +0.1 570,512 + +0.3
Or see this region's nucleotide sequence