Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv3715c

Experiment: 7H9 with Isoniazid 0.025 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Isoniazid 0.025 ug/mL
4,158,920	+				-0.5
4,159,121	+		Rv3714c	0.21	-2.5
4,159,122	-		Rv3714c	0.21	-0.2
4,159,122	-		Rv3714c	0.21	-1.9
4,159,122	-		Rv3714c	0.21	-0.5
4,159,122	-		Rv3714c	0.21	-0.3
4,159,324	+		Rv3714c	0.44	-0.8
4,159,324	+		Rv3714c	0.44	-2.3
4,159,325	-		Rv3714c	0.44	-2.7
4,159,418	+		Rv3714c	0.55	-0.4
4,159,496	-		Rv3714c	0.63	+1.6
4,159,594	-		Rv3714c	0.74	-0.4
4,159,600	+		Rv3714c	0.75	-0.4
4,159,601	-		Rv3714c	0.75	-0.1
4,159,679	+		Rv3714c	0.84	-0.5
4,159,679	+		Rv3714c	0.84	-1.1
4,159,680	-		Rv3714c	0.84	+0.1
4,159,680	-		Rv3714c	0.84	+2.2
4,159,680	-		Rv3714c	0.84	-1.0
4,159,680	-		Rv3714c	0.84	+2.7
4,160,029	-		Rv3715c	0.23	+0.4
4,160,193	+		Rv3715c	0.50	+1.3
4,160,399	+		Rv3715c	0.83	+3.4
4,160,572	-		Rv3716c	0.15	-0.3
4,161,000	+				-1.5
4,161,019	+				+1.2
4,161,019	+				+0.8
4,161,052	+				+1.8
4,161,052	+				+2.3
4,161,053	-				+0.4
4,161,491	-		Rv3717	0.61	-0.2
4,161,491	-		Rv3717	0.61	+1.5