Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv3532

Experiment: 7H9 with Isoniazid 0.025 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Isoniazid 0.025 ug/mL
3,968,345	+		Rv3531c	0.47	-0.8
3,968,511	-		Rv3531c	0.62	+1.1
3,968,511	-		Rv3531c	0.62	-0.7
3,968,611	+		Rv3531c	0.70	-2.0
3,968,612	-		Rv3531c	0.70	-0.5
3,968,614	-		Rv3531c	0.71	-0.3
3,968,685	+		Rv3531c	0.77	-1.9
3,968,797	-		Rv3531c	0.87	-0.3
3,968,841	+				-0.4
3,969,120	-				+1.0
3,969,311	-				-0.8
3,969,311	-				+0.2
3,969,325	-				-0.9
3,969,394	+				-1.5
3,969,394	+				-0.0
3,969,395	-				-0.1
3,969,395	-				+0.5
3,969,395	-				-0.9
3,969,396	+				-0.9
3,969,481	+		Rv3532	0.11	-0.9
3,969,563	-		Rv3532	0.18	+0.1
3,969,766	+		Rv3532	0.35	-0.6
3,969,802	+		Rv3532	0.38	-0.6
3,969,802	+		Rv3532	0.38	+2.3
3,969,802	+		Rv3532	0.38	-0.5
3,969,803	-		Rv3532	0.38	-0.7
3,969,803	-		Rv3532	0.38	+0.3
3,969,803	-		Rv3532	0.38	+0.1
3,969,809	-		Rv3532	0.38	+1.5
3,969,849	+		Rv3532	0.41	+1.0
3,969,849	+		Rv3532	0.41	-0.3
3,969,849	+		Rv3532	0.41	+2.9
3,969,850	-		Rv3532	0.42	-1.5
3,969,850	-		Rv3532	0.42	+0.0
3,969,850	-		Rv3532	0.42	-0.7
3,969,850	-		Rv3532	0.42	+2.9
3,970,194	-		Rv3532	0.70	+0.7
3,970,523	+				+0.7
3,970,523	+				+0.2
3,970,524	-				+2.3
3,970,637	+				-0.6
3,970,637	+				+0.3
3,970,638	-				+0.4
3,970,638	-				-0.6
3,970,640	+				-0.5
3,970,641	-				-0.1
3,970,786	+				-0.7
3,971,067	+		Rv3533c	0.21	+0.3
3,971,098	-		Rv3533c	0.22	-0.5
3,971,191	+		Rv3533c	0.28	-0.6
3,971,217	+		Rv3533c	0.29	-0.9
3,971,217	+		Rv3533c	0.29	+1.3
3,971,281	-		Rv3533c	0.33	+0.1
3,971,281	-		Rv3533c	0.33	-0.2