Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv3379c

Experiment: 7H9 with Isoniazid 0.025 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Isoniazid 0.025 ug/mL
3,792,289	+				-0.3
3,792,289	+				-0.9
3,792,289	+				-1.7
3,792,290	-				-2.2
3,792,331	-				-2.5
3,792,443	-				-0.6
3,792,548	+		Rv3378c	0.21	-0.8
3,792,781	+		Rv3378c	0.47	+0.9
3,793,186	+				-1.6
3,793,208	-				-0.0
3,793,336	-				+0.0
3,793,426	+		Rv3379c	0.10	-1.1
3,793,427	-		Rv3379c	0.11	-0.8
3,793,466	+		Rv3379c	0.13	-1.6
3,793,503	+		Rv3379c	0.15	-1.1
3,793,697	+		Rv3379c	0.27	-1.1
3,793,818	+		Rv3379c	0.35	+0.3
3,794,049	+		Rv3379c	0.49	+0.9
3,794,291	+		Rv3379c	0.64	+1.2
3,794,291	+		Rv3379c	0.64	+0.3
3,794,292	-		Rv3379c	0.64	-1.2
3,794,336	+		Rv3379c	0.67	-1.0
3,794,336	+		Rv3379c	0.67	+1.6
3,794,339	+		Rv3379c	0.67	+0.2
3,794,339	+		Rv3379c	0.67	-1.1
3,794,339	+		Rv3379c	0.67	+0.2
3,794,388	+		Rv3379c	0.70	+0.8
3,794,438	-		Rv3379c	0.73	-0.4
3,794,441	+		Rv3379c	0.73	-0.1
3,794,441	+		Rv3379c	0.73	-0.3
3,794,533	+		Rv3379c	0.79	+0.3
3,794,534	-		Rv3379c	0.79	-0.4
3,794,918	-				+0.6
3,795,055	-				-0.1