Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv2029c

Experiment: 7H9 with Isoniazid 0.025 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Isoniazid 0.025 ug/mL
2,274,510	+				-1.5
2,274,511	-				-0.7
2,274,511	-				-2.6
2,274,511	-				-0.1
2,274,511	-				+0.4
2,274,511	-				-0.6
2,274,514	+				+0.0
2,274,514	+				-1.4
2,274,514	+				+0.0
2,274,514	+				+1.5
2,274,515	-				-0.7
2,274,515	-				-0.3
2,274,515	-				+0.1
2,274,515	-				-1.7
2,274,515	-				+0.0
2,274,515	-				-3.1
2,274,515	-				-0.1
2,274,693	-		Rv2028c	0.15	+2.2
2,274,718	-		Rv2028c	0.18	-0.3
2,275,037	-		Rv2028c	0.56	-1.5
2,275,370	-				-0.8
2,275,445	+				-1.3
2,275,446	-				-0.8
2,275,946	+		Rv2029c	0.53	+0.6
2,275,947	-		Rv2029c	0.53	-0.5
2,276,292	-		Rv2029c	0.87	+0.4
2,276,443	-				-0.3
2,276,667	-		Rv2030c	0.11	-0.7
2,276,918	-		Rv2030c	0.23	-0.1
2,276,918	-		Rv2030c	0.23	-0.6
2,277,057	+		Rv2030c	0.30	-0.0
2,277,057	+		Rv2030c	0.30	+0.9
2,277,058	-		Rv2030c	0.30	-1.7
2,277,099	+		Rv2030c	0.32	+2.5
2,277,099	+		Rv2030c	0.32	+0.2
2,277,100	-		Rv2030c	0.32	-0.6
2,277,231	+		Rv2030c	0.39	-0.4
2,277,231	+		Rv2030c	0.39	-0.6
2,277,231	+		Rv2030c	0.39	-0.2
2,277,322	-		Rv2030c	0.43	-0.4
2,277,372	+		Rv2030c	0.46	-0.6
2,277,373	-		Rv2030c	0.46	+0.9