Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv1258c

Experiment: 7H9 with Isoniazid 0.025 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Isoniazid 0.025 ug/mL
1,405,596	+		Rv1257c	0.64	-0.1
1,405,596	+		Rv1257c	0.64	-0.5
1,405,597	-		Rv1257c	0.64	-0.7
1,405,597	-		Rv1257c	0.64	-1.9
1,405,601	-		Rv1257c	0.65	-0.2
1,405,619	-		Rv1257c	0.66	-0.5
1,405,747	+		Rv1257c	0.75	-1.4
1,405,748	-		Rv1257c	0.75	-1.4
1,406,017	+				-0.6
1,406,298	-		Rv1258c	0.17	-1.1
1,406,334	-		Rv1258c	0.20	-0.3
1,406,334	-		Rv1258c	0.20	-0.0
1,406,340	+		Rv1258c	0.21	-0.7
1,406,340	+		Rv1258c	0.21	+0.2
1,406,341	-		Rv1258c	0.21	+1.4
1,406,341	-		Rv1258c	0.21	-0.6
1,406,341	-		Rv1258c	0.21	-0.8
1,406,344	+		Rv1258c	0.21	-0.5
1,406,344	+		Rv1258c	0.21	-0.1
1,406,345	-		Rv1258c	0.21	-1.0
1,406,345	-		Rv1258c	0.21	-0.9
1,406,345	-		Rv1258c	0.21	-0.2
1,406,347	-		Rv1258c	0.21	-2.1
1,406,347	-		Rv1258c	0.21	-0.1
1,406,367	+		Rv1258c	0.23	-2.9
1,406,368	-		Rv1258c	0.23	-0.8
1,406,508	+		Rv1258c	0.34	-0.1
1,406,626	-		Rv1258c	0.43	-0.0
1,406,626	-		Rv1258c	0.43	-0.1
1,406,812	+		Rv1258c	0.58	-0.5
1,406,813	-		Rv1258c	0.58	+0.4
1,406,878	+		Rv1258c	0.63	-0.6
1,406,878	+		Rv1258c	0.63	+0.6
1,407,138	+		Rv1258c	0.84	-0.4
1,407,260	+				-0.2
1,407,344	+				+0.6
1,407,344	+				-0.3
1,407,345	-				+0.3
1,407,825	-		Rv1259	0.54	+1.9
1,408,140	+		Rv1259	0.89	+3.2
1,408,161	-				+0.7