Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv0188

Experiment: 7H9 with Isoniazid 0.025 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Isoniazid 0.025 ug/mL
218,596	+				+1.0
218,610	+				-0.2
218,614	+				-0.3
218,615	-				+0.8
218,820	+		Rv0187	0.17	-0.4
218,981	+		Rv0187	0.42	+0.7
218,981	+		Rv0187	0.42	+1.7
218,982	-		Rv0187	0.42	+1.1
219,148	+		Rv0187	0.67	+0.7
219,205	+		Rv0187	0.75	+2.3
219,206	-		Rv0187	0.76	-0.5
219,298	-		Rv0187	0.89	-0.3
219,492	-				-1.5
219,613	-		Rv0188	0.29	+0.3
219,860	-		Rv0188	0.87	-0.6
219,915	+				-0.3
219,916	-				+1.0