Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv3648c

Experiment: 7H9 with Isoniazid 0.025 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Isoniazid 0.025 ug/mL
4,087,400	-				-0.8
4,087,497	+				-1.6
4,087,498	-				+0.2
4,087,498	-				+0.1
4,087,628	+				-0.8
4,087,628	+				-0.6
4,087,628	+				-2.2
4,087,629	-				+1.9
4,087,629	-				-0.4
4,088,070	-		Rv3647c	0.79	-0.6
4,088,154	-				-1.1
4,088,154	-				-0.1
4,088,227	-				+0.3
4,088,270	+				+0.5
4,088,270	+				-1.5
4,088,271	-				+2.9
4,088,271	-				-1.0
4,088,766	-				-2.3
4,088,766	-				-0.7
4,088,991	+				-1.0
4,089,202	-		Rv3649	0.18	+0.1
4,089,286	+		Rv3649	0.22	+0.7
4,089,413	-		Rv3649	0.27	-0.1