Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv3360

Experiment: 7H9 with Isoniazid 0.025 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Isoniazid 0.025 ug/mL
3,771,862	+		Rv3359	0.43	-0.1
3,771,863	-		Rv3359	0.44	+1.1
3,771,863	-		Rv3359	0.44	-0.5
3,771,863	-		Rv3359	0.44	-1.3
3,771,866	+		Rv3359	0.44	+0.4
3,771,866	+		Rv3359	0.44	-0.6
3,771,866	+		Rv3359	0.44	+0.5
3,771,866	+		Rv3359	0.44	-1.0
3,771,866	+		Rv3359	0.44	-0.3
3,771,866	+		Rv3359	0.44	+0.8
3,771,867	-		Rv3359	0.44	-0.9
3,771,867	-		Rv3359	0.44	-1.3
3,771,948	+		Rv3359	0.51	-0.5
3,772,145	+		Rv3359	0.67	-0.7
3,772,145	+		Rv3359	0.67	+0.1
3,772,146	-		Rv3359	0.67	-0.8
3,772,146	-		Rv3359	0.67	+0.0
3,772,146	-		Rv3359	0.67	+0.3
3,772,248	-		Rv3359	0.76	-0.9
3,772,248	-		Rv3359	0.76	-0.4
3,772,474	+				-1.9
3,772,475	-				-0.5
3,772,475	-				-0.4
3,772,532	+				-1.3
3,772,532	+				-0.3
3,772,621	+				+1.3
3,772,905	+		Rv3360	0.69	-0.5
3,772,905	+		Rv3360	0.69	-2.2
3,772,906	-		Rv3360	0.69	-1.3
3,772,906	-		Rv3360	0.69	-0.7
3,773,017	+				-0.1
3,773,018	-				-0.0