Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv2780

Experiment: 7H9 with Isoniazid 0.025 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Isoniazid 0.025 ug/mL
3,085,891	+		Rv2778c	0.38	-1.0
3,085,892	-		Rv2778c	0.38	+0.5
3,085,913	+		Rv2778c	0.42	+0.3
3,085,914	-		Rv2778c	0.43	+0.0
3,085,914	-		Rv2778c	0.43	+2.0
3,085,926	+		Rv2778c	0.45	+1.8
3,085,927	-		Rv2778c	0.45	-0.4
3,085,927	-		Rv2778c	0.45	-0.2
3,085,927	-		Rv2778c	0.45	+3.4
3,086,118	+		Rv2778c	0.86	+2.8
3,086,118	+		Rv2778c	0.86	-1.0
3,086,195	-				-0.5
3,086,217	-				-0.0
3,086,217	-				-1.1
3,086,266	-				-0.9
3,086,376	-		Rv2779c	0.30	-1.2
3,086,376	-		Rv2779c	0.30	-0.7
3,086,376	-		Rv2779c	0.30	-0.3
3,086,511	-		Rv2779c	0.55	+2.8
3,086,593	+		Rv2779c	0.70	-0.8
3,086,750	-				-1.8
3,086,798	+				-0.4
3,086,897	-				-2.1
3,087,029	-		Rv2780	0.19	-2.3
3,087,168	+		Rv2780	0.31	-0.9
3,087,200	-		Rv2780	0.34	-0.2
3,087,258	+		Rv2780	0.39	-0.4
3,087,258	+		Rv2780	0.39	+0.4
3,087,620	-		Rv2780	0.72	+1.7
3,087,667	-		Rv2780	0.76	-0.4
3,087,751	-		Rv2780	0.83	+0.7
3,088,173	+		Rv2781c	0.22	-0.7
3,088,174	-		Rv2781c	0.22	-0.4
3,088,521	+		Rv2781c	0.55	-0.4
3,088,675	-		Rv2781c	0.70	-0.6
3,088,701	+		Rv2781c	0.73	-1.1
3,088,702	-		Rv2781c	0.73	-0.9
3,088,704	+		Rv2781c	0.73	-0.4
3,088,705	-		Rv2781c	0.73	-0.5
3,088,735	-		Rv2781c	0.76	-0.3
3,088,857	+		Rv2781c	0.88	-0.1