Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv2681

Experiment: 7H9 with Isoniazid 0.025 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Isoniazid 0.025 ug/mL
2,995,797	-		Rv2679	0.82	+0.8
2,995,989	+				-0.7
2,996,277	-		Rv2680	0.27	-1.2
2,996,367	-		Rv2680	0.41	+0.2
2,996,402	-		Rv2680	0.47	-1.0
2,996,875	+		Rv2681	0.10	+4.1
2,996,987	-		Rv2681	0.19	+2.2
2,997,116	+		Rv2681	0.29	+2.9
2,997,133	+		Rv2681	0.30	+3.8
2,997,135	+		Rv2681	0.30	+1.4
2,997,136	-		Rv2681	0.30	+0.8
2,997,136	-		Rv2681	0.30	+1.8
2,997,206	-		Rv2681	0.35	+1.3
2,997,283	-		Rv2681	0.41	+0.4
2,997,576	-		Rv2681	0.64	+0.6
2,997,576	-		Rv2681	0.64	+0.3
2,997,942	+				+0.0
2,997,943	-				-1.6
2,997,982	+				+1.1
2,997,982	+				-0.0
2,997,982	+				+0.9