Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv2038c

Experiment: 7H9 with Isoniazid 0.025 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Isoniazid 0.025 ug/mL
2,282,748	+				-1.8
2,282,788	-				-0.0
2,283,281	+		Rv2037c	0.55	+0.8
2,283,281	+		Rv2037c	0.55	-0.2
2,283,282	-		Rv2037c	0.55	-0.2
2,283,499	-		Rv2037c	0.77	-0.7
2,283,880	+		Rv2038c	0.15	-0.8
2,283,886	+		Rv2038c	0.15	-0.0
2,284,225	+		Rv2038c	0.47	-0.7
2,284,653	+		Rv2038c	0.87	-0.8
2,284,858	-				+1.8
2,284,923	+		Rv2039c	0.15	+1.3
2,284,924	-		Rv2039c	0.15	+0.3
2,285,083	-		Rv2039c	0.34	+0.9
2,285,171	-		Rv2039c	0.44	-0.2
2,285,791	+		Rv2040c	0.18	+1.8
2,285,796	-		Rv2040c	0.19	+2.1