Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv1833c

Experiment: 7H9 with Isoniazid 0.025 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Isoniazid 0.025 ug/mL
2,078,687	-				-1.8
2,078,746	+				-0.5
2,078,747	-				+0.1
2,078,758	-				-0.3
2,078,865	+				-0.5
2,078,866	-				+2.4
2,079,191	-		Rv1833c	0.30	-0.2
2,079,250	-		Rv1833c	0.37	-0.1
2,079,641	+		Rv1833c	0.83	-0.2
2,079,642	-		Rv1833c	0.83	-0.2
2,079,790	+				-0.1
2,080,281	+		Rv1834	0.52	-0.8
2,080,282	-		Rv1834	0.52	-0.9
2,080,282	-		Rv1834	0.52	-0.1
2,080,457	+		Rv1834	0.72	-0.0
2,080,458	-		Rv1834	0.72	+2.8
2,080,458	-		Rv1834	0.72	-2.6
2,080,661	+				-0.5
2,080,662	-				+0.8
2,080,710	+				-0.8
2,080,710	+				-0.5
2,080,711	-				-0.4
2,080,711	-				-0.2
2,080,753	+				-1.5