Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv1614

Experiment: 7H9 with Isoniazid 0.025 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Isoniazid 0.025 ug/mL
1,814,038	+		Rv1614	0.62	+0.1
1,814,038	+		Rv1614	0.62	+1.0
1,814,620	+				-1.3
1,814,621	-				-1.8
1,814,621	-				-0.6
1,814,707	+				-0.6
1,814,747	-				-0.9
1,814,756	-				-0.1
1,814,761	-				-0.1
1,814,850	+				-0.5
1,814,850	+				-0.4
1,814,850	+				+1.8
1,814,850	+				-0.9
1,814,851	-				-0.7
1,814,851	-				-0.5
1,814,861	-				-0.2
1,814,925	-				-0.3
1,815,409	+		Rv1615	0.35	-1.6
1,815,409	+		Rv1615	0.35	+0.5
1,815,409	+		Rv1615	0.35	+2.3
1,815,409	+		Rv1615	0.35	-0.3
1,815,539	-		Rv1615	0.65	-1.1
1,815,549	+		Rv1615	0.67	-0.3