Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv1129c

Experiment: 7H9 with Isoniazid 0.025 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Isoniazid 0.025 ug/mL
1,252,156	+		Rv1128c	0.40	-1.5
1,252,380	-		Rv1128c	0.56	-0.5
1,252,577	+		Rv1128c	0.71	-0.6
1,252,984	-				+1.8
1,252,984	-				-0.5
1,253,037	+				+0.8
1,253,037	+				-0.5
1,253,995	-		Rv1129c	0.63	-0.8
1,254,033	-		Rv1129c	0.66	+0.1
1,254,312	-		Rv1129c	0.85	-0.7
1,254,398	+				-0.7
1,254,398	+				-0.4
1,254,398	+				+3.2
1,254,398	+				+1.0
1,254,498	-				+2.0
1,254,522	+				-0.3
1,254,697	-				+1.1
1,254,697	-				-1.0
1,254,994	+		Rv1130	0.28	-0.2
1,254,994	+		Rv1130	0.28	+1.8
1,255,198	-		Rv1130	0.41	+0.8
1,255,467	+		Rv1130	0.58	-1.0