Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv1022

Experiment: 7H9 with Isoniazid 0.025 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Isoniazid 0.025 ug/mL
1,142,752	+				+0.4
1,142,869	-		Rv1021	0.20	-0.8
1,143,032	-		Rv1021	0.37	+0.5
1,143,711	+				+0.2
1,143,713	+				+0.7
1,143,973	+		Rv1022	0.32	-0.7
1,144,109	+		Rv1022	0.51	-1.2
1,144,110	-		Rv1022	0.51	+0.0
1,144,331	-		Rv1022	0.81	-0.7
1,144,334	+		Rv1022	0.82	+0.2
1,144,334	+		Rv1022	0.82	-1.4
1,144,407	+				-1.7
1,144,411	+				+1.2
1,144,466	-				+0.2
1,144,466	-				-3.0