Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv0980c

Experiment: 7H9 with Isoniazid 0.025 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Isoniazid 0.025 ug/mL
1,094,576	+				-0.6
1,094,576	+				+0.1
1,094,577	-				+0.2
1,095,081	+				+0.2
1,095,082	-				-0.6
1,095,082	-				+1.8
1,095,149	+				+0.1
1,095,149	+				-0.5
1,095,286	+		Rv0980c	0.15	+1.2
1,095,286	+		Rv0980c	0.15	+3.3
1,095,286	+		Rv0980c	0.15	+1.0
1,095,287	-		Rv0980c	0.15	+0.1
1,095,287	-		Rv0980c	0.15	+1.1
1,095,287	-		Rv0980c	0.15	+1.3
1,095,287	-		Rv0980c	0.15	-0.8
1,095,287	-		Rv0980c	0.15	-0.4
1,095,287	-		Rv0980c	0.15	-0.3
1,095,287	-		Rv0980c	0.15	-1.9
1,095,536	-		Rv0980c	0.33	-2.4
1,095,536	-		Rv0980c	0.33	+0.2
1,095,536	-		Rv0980c	0.33	-1.4
1,095,536	-		Rv0980c	0.33	+1.0
1,096,205	+		Rv0980c	0.82	+0.6
1,096,205	+		Rv0980c	0.82	-0.5
1,096,205	+		Rv0980c	0.82	-0.6
1,096,768	+				+0.1
1,096,769	-				-0.6
1,096,769	-				+0.3
1,097,114	-		Rv0981	0.43	+0.9
1,097,118	-		Rv0981	0.43	+2.4
1,097,118	-		Rv0981	0.43	+0.0
1,097,364	-		Rv0981	0.79	-1.5
1,097,364	-		Rv0981	0.79	-1.2
1,097,416	+		Rv0981	0.86	-2.0
1,097,417	-		Rv0981	0.87	-0.2
1,097,420	+		Rv0981	0.87	+2.2
1,097,420	+		Rv0981	0.87	-0.2
1,097,421	-		Rv0981	0.87	+0.7
1,097,421	-		Rv0981	0.87	+0.4
1,097,421	-		Rv0981	0.87	+0.4