Experiment: 7H9 with Isoniazid 0.025 ug/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Rv0788 and Rv0789c are separated by 16 nucleotides Rv0789c and Rv0790c are separated by 21 nucleotides Rv0790c and Rv0791c overlap by 4 nucleotides
Rv0788: Rv0788 - Probable phosphoribosylformylglycinamidine synthase I PURG (FGAM synthase I), at 882,760 to 883,434
Rv0788
Rv0789c: Rv0789c - Hypothetical protein, at 883,451 to 884,050
Rv0789c
Rv0790c: Rv0790c - Hypothetical protein, at 884,072 to 884,800
Rv0790c
Rv0791c: Rv0791c - Conserved protein, at 884,797 to 885,840
Rv0791c
Position (kb) 884
885 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 883.493 kb on + strand at 883.493 kb on + strand at 883.728 kb on + strand, within Rv0789c at 883.782 kb on - strand, within Rv0789c at 883.875 kb on + strand, within Rv0789c at 884.150 kb on + strand, within Rv0790c at 884.151 kb on - strand, within Rv0790c at 884.232 kb on + strand, within Rv0790c at 884.232 kb on + strand, within Rv0790c at 884.376 kb on + strand, within Rv0790c at 884.376 kb on + strand, within Rv0790c at 884.376 kb on + strand, within Rv0790c at 884.376 kb on + strand, within Rv0790c at 884.376 kb on + strand, within Rv0790c at 884.377 kb on - strand, within Rv0790c at 884.632 kb on - strand, within Rv0790c at 884.649 kb on + strand, within Rv0790c at 884.649 kb on + strand, within Rv0790c at 884.650 kb on - strand, within Rv0790c at 884.652 kb on + strand, within Rv0790c at 884.653 kb on - strand, within Rv0790c at 884.655 kb on + strand, within Rv0790c at 884.655 kb on + strand, within Rv0790c at 884.656 kb on - strand, within Rv0790c at 884.745 kb on + strand at 884.745 kb on + strand at 884.746 kb on - strand at 884.859 kb on - strand at 884.859 kb on - strand at 884.918 kb on + strand, within Rv0791c at 884.919 kb on - strand, within Rv0791c at 885.285 kb on - strand, within Rv0791c at 885.380 kb on + strand, within Rv0791c at 885.381 kb on - strand, within Rv0791c at 885.491 kb on + strand, within Rv0791c at 885.492 kb on - strand, within Rv0791c at 885.685 kb on + strand, within Rv0791c
Per-strain Table
Position Strand Gene LocusTag Fraction 7H9 with Isoniazid 0.025 ug/mL remove 883,493 + -0.2 883,493 + -0.1 883,728 + Rv0789c 0.46 -0.8 883,782 - Rv0789c 0.55 +0.5 883,875 + Rv0789c 0.71 -0.0 884,150 + Rv0790c 0.11 +0.4 884,151 - Rv0790c 0.11 +0.6 884,232 + Rv0790c 0.22 -1.1 884,232 + Rv0790c 0.22 -0.7 884,376 + Rv0790c 0.42 +2.8 884,376 + Rv0790c 0.42 +1.8 884,376 + Rv0790c 0.42 -0.8 884,376 + Rv0790c 0.42 +0.8 884,376 + Rv0790c 0.42 -0.8 884,377 - Rv0790c 0.42 -0.0 884,632 - Rv0790c 0.77 -1.3 884,649 + Rv0790c 0.79 -0.4 884,649 + Rv0790c 0.79 +0.4 884,650 - Rv0790c 0.79 +0.3 884,652 + Rv0790c 0.80 -0.3 884,653 - Rv0790c 0.80 +0.1 884,655 + Rv0790c 0.80 +1.0 884,655 + Rv0790c 0.80 -1.3 884,656 - Rv0790c 0.80 +0.3 884,745 + -0.7 884,745 + -0.6 884,746 - -1.6 884,859 - -0.2 884,859 - -1.8 884,918 + Rv0791c 0.12 +0.2 884,919 - Rv0791c 0.12 -1.0 885,285 - Rv0791c 0.47 -1.8 885,380 + Rv0791c 0.56 +0.5 885,381 - Rv0791c 0.56 -0.1 885,491 + Rv0791c 0.66 +0.4 885,492 - Rv0791c 0.67 -0.6 885,685 + Rv0791c 0.85 +0.8
Or see this region's nucleotide sequence