Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv0783c
Experiment: 7H9 with Isoniazid 0.025 ug/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | 7H9 with Isoniazid 0.025 ug/mL |
---|---|---|---|---|---|
remove | |||||
875,860 | - | Rv0782 | 0.68 | -0.8 | |
876,085 | + | Rv0782 | 0.82 | +0.2 | |
876,320 | + | +0.8 | |||
876,325 | - | -0.1 | |||
876,419 | - | +0.4 | |||
876,462 | + | -0.6 | |||
877,269 | - | Rv0783c | 0.28 | +0.5 | |
877,426 | + | Rv0783c | 0.37 | -0.4 | |
877,691 | - | Rv0783c | 0.54 | -0.3 | |
878,034 | - | Rv0783c | 0.75 | +0.4 | |
878,560 | + | -0.8 | |||
878,836 | + | Rv0784 | 0.29 | -0.0 | |
879,432 | - | -0.4 |
Or see this region's nucleotide sequence