Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv0767c
Experiment: 7H9 with Isoniazid 0.025 ug/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | 7H9 with Isoniazid 0.025 ug/mL |
---|---|---|---|---|---|
remove | |||||
859,229 | - | Rv0766c | 0.30 | -0.7 | |
859,492 | + | Rv0766c | 0.52 | +0.5 | |
859,867 | - | Rv0766c | 0.83 | +1.8 | |
860,030 | - | -0.1 | |||
860,099 | - | +0.2 | |||
860,127 | + | +2.8 | |||
860,154 | + | Rv0767c | 0.13 | -0.3 | |
860,180 | + | Rv0767c | 0.17 | +0.4 | |
860,466 | + | Rv0767c | 0.62 | +2.4 | |
860,502 | + | Rv0767c | 0.67 | +0.5 | |
860,502 | + | Rv0767c | 0.67 | -0.1 | |
860,502 | + | Rv0767c | 0.67 | +0.3 | |
860,503 | - | Rv0767c | 0.68 | -0.2 | |
860,508 | + | Rv0767c | 0.68 | +0.1 | |
860,508 | + | Rv0767c | 0.68 | +0.5 | |
860,508 | + | Rv0767c | 0.68 | -0.2 | |
860,603 | + | Rv0767c | 0.83 | +1.6 | |
860,604 | - | Rv0767c | 0.83 | +0.3 | |
860,909 | + | +1.0 | |||
861,174 | + | Rv0768 | 0.18 | -0.5 | |
861,255 | + | Rv0768 | 0.23 | -1.6 | |
861,255 | + | Rv0768 | 0.23 | -1.8 | |
861,256 | - | Rv0768 | 0.23 | -1.3 |
Or see this region's nucleotide sequence