Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv3843c

Experiment: 7H9 with Levofloxacin 0.3 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Levofloxacin 0.3 ug/mL
4,314,644	+		Rv3841	0.85	-1.2
4,314,644	+		Rv3841	0.85	+0.5
4,314,645	-		Rv3841	0.86	-1.0
4,314,721	+				-2.2
4,314,721	+				+0.6
4,314,722	-				-1.6
4,314,722	-				-1.2
4,314,803	+				-0.4
4,314,804	-				+0.7
4,314,851	-		Rv3842c	0.14	-0.3
4,314,916	+		Rv3842c	0.22	+1.2
4,314,917	-		Rv3842c	0.22	+0.6
4,314,989	-		Rv3842c	0.30	+0.1
4,315,129	-		Rv3842c	0.47	+2.6
4,315,320	+		Rv3842c	0.71	+1.0
4,315,320	+		Rv3842c	0.71	+0.0
4,315,468	+		Rv3842c	0.88	+0.3
4,315,469	-		Rv3842c	0.89	+0.1
4,315,481	+				+1.0
4,315,481	+				-0.5
4,315,481	+				+0.3
4,315,481	+				-1.6
4,315,569	+				+0.8
4,315,570	-				+1.1
4,315,570	-				-0.1
4,316,003	-		Rv3843c	0.42	+0.2
4,316,003	-		Rv3843c	0.42	-1.6
4,316,340	-		Rv3843c	0.75	-2.7
4,316,607	+				+0.0
4,316,724	+				-2.7
4,316,724	+				-0.8
4,316,724	+				-0.3
4,316,724	+				+0.4
4,316,725	-				+0.2
4,316,725	-				+1.0
4,316,725	-				-1.6
4,316,728	+				-1.9
4,316,756	-				-0.9
4,316,788	+				-2.8
4,316,789	-				-1.3
4,316,897	+				+0.7
4,316,898	-				-0.1
4,316,898	-				-0.1
4,316,926	+				-0.6
4,316,927	-				-0.4
4,317,029	+				+0.4
4,317,060	+				+0.1
4,317,060	+				-1.1
4,317,060	+				-0.1
4,317,061	-				+0.3
4,317,165	-				-0.2
4,317,250	+				+0.8
4,317,421	-				+3.6