Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv3652

Experiment: 7H9 with Levofloxacin 0.3 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Levofloxacin 0.3 ug/mL
4,093,553	+				-1.9
4,093,638	+				-0.4
4,093,638	+				-0.2
4,093,638	+				-0.4
4,093,792	-		Rv3652	0.51	-1.0
4,093,814	+		Rv3652	0.58	-1.2
4,093,814	+		Rv3652	0.58	-0.6
4,093,815	-		Rv3652	0.58	-0.6
4,094,562	-				-0.5
4,094,585	-				-0.9
4,094,613	-				-0.7
4,094,613	-				-0.1
4,094,650	+				-1.4
4,094,924	+				-0.2
4,094,924	+				-0.7
4,094,929	-				-0.3