Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv3590c

Experiment: 7H9 with Levofloxacin 0.3 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Levofloxacin 0.3 ug/mL
4,030,539	+				-0.3
4,030,540	-				-0.7
4,030,566	-				-0.9
4,030,791	+		Rv3589	0.33	+1.0
4,030,791	+		Rv3589	0.33	-0.7
4,030,791	+		Rv3589	0.33	-0.0
4,030,792	-		Rv3589	0.33	-0.6
4,031,414	-				-0.6
4,031,857	-		Rv3590c	0.26	-1.3
4,032,059	+		Rv3590c	0.37	-1.3
4,032,073	-		Rv3590c	0.38	+0.2
4,032,180	+		Rv3590c	0.44	-0.0
4,032,180	+		Rv3590c	0.44	-0.0
4,032,812	-		Rv3590c	0.80	-0.7
4,032,899	+		Rv3590c	0.85	-0.8
4,032,899	+		Rv3590c	0.85	-0.5
4,032,900	-		Rv3590c	0.85	-0.8
4,032,975	-		Rv3590c	0.90	-0.1
4,033,367	-		Rv3591c	0.13	+3.0
4,033,458	+		Rv3591c	0.24	+2.4
4,033,611	+		Rv3591c	0.44	-1.7
4,033,918	-		Rv3591c	0.84	-0.3