Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv3365c

Experiment: 7H9 with Levofloxacin 0.3 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Levofloxacin 0.3 ug/mL
3,774,436	-		Rv3363c	0.81	+1.9
3,774,436	-		Rv3363c	0.81	+0.4
3,774,455	+		Rv3363c	0.86	-1.3
3,774,456	-		Rv3363c	0.87	+2.6
3,774,484	-				+0.4
3,774,746	+		Rv3364c	0.67	-0.6
3,774,746	+		Rv3364c	0.67	-5.0
3,775,088	-				+1.8
3,775,122	-				-0.8
3,775,368	+		Rv3365c	0.19	-3.0
3,775,368	+		Rv3365c	0.19	-2.4
3,775,368	+		Rv3365c	0.19	+0.0
3,775,369	-		Rv3365c	0.19	-2.1
3,775,558	+		Rv3365c	0.26	-1.5
3,775,616	+		Rv3365c	0.28	-1.8
3,775,617	-		Rv3365c	0.28	-1.2
3,775,708	+		Rv3365c	0.32	+0.0
3,775,955	-		Rv3365c	0.41	+0.5
3,776,354	+		Rv3365c	0.56	-1.2
3,776,354	+		Rv3365c	0.56	+0.4
3,776,354	+		Rv3365c	0.56	-2.5
3,776,354	+		Rv3365c	0.56	-2.4
3,776,355	-		Rv3365c	0.56	+0.8
3,776,355	-		Rv3365c	0.56	-1.8
3,776,355	-		Rv3365c	0.56	+1.0
3,776,355	-		Rv3365c	0.56	+4.8
3,776,456	-		Rv3365c	0.60	+0.2
3,776,999	+		Rv3365c	0.81	-1.6
3,777,140	+		Rv3365c	0.86	-2.2
3,777,141	-		Rv3365c	0.86	+2.2
3,777,141	-		Rv3365c	0.86	-2.0
3,777,227	+		Rv3365c	0.90	-2.2
3,777,227	+		Rv3365c	0.90	-3.9
3,777,227	+		Rv3365c	0.90	-1.6
3,777,227	+		Rv3365c	0.90	-2.7
3,777,227	+		Rv3365c	0.90	-1.6
3,777,228	-		Rv3365c	0.90	-0.6
3,777,228	-		Rv3365c	0.90	+0.7
3,777,228	-		Rv3365c	0.90	+0.0
3,777,450	+				-1.5
3,777,563	+				-1.4
3,777,563	+				-1.5
3,777,618	+				-0.0
3,777,642	-				-0.0
3,777,642	-				+1.8
3,777,756	+				-0.0
3,777,756	+				-0.5
3,777,757	-				+2.8
3,777,888	-		Rv3366	0.32	+1.8
3,778,075	+		Rv3366	0.73	-1.9
3,778,075	+		Rv3366	0.73	-1.5
3,778,232	+				-0.4
3,778,233	-				+0.9
3,778,373	+				-1.0