Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv3202c

Experiment: 7H9 with Levofloxacin 0.3 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Levofloxacin 0.3 ug/mL
3,576,081	+		Rv3201c	0.71	-3.1
3,576,082	-		Rv3201c	0.71	-0.4
3,576,189	+		Rv3201c	0.74	-3.7
3,576,189	+		Rv3201c	0.74	+1.8
3,576,189	+		Rv3201c	0.74	-3.3
3,576,415	-		Rv3201c	0.81	-1.3
3,576,672	-		Rv3201c	0.89	+3.1
3,576,694	-		Rv3201c	0.90	-1.4
3,576,993	-				+0.6
3,577,238	+				-2.0
3,577,238	+				+1.6
3,577,238	+				-0.4
3,577,239	-				+2.1
3,577,304	+				-3.5
3,577,531	+		Rv3202c	0.16	-1.3
3,577,973	-		Rv3202c	0.30	-2.2
3,578,318	-		Rv3202c	0.41	-3.4
3,578,355	+		Rv3202c	0.42	-2.3
3,578,471	+		Rv3202c	0.45	-0.9
3,578,471	+		Rv3202c	0.45	-2.7
3,578,472	-		Rv3202c	0.45	-3.7
3,578,472	-		Rv3202c	0.45	-3.1
3,578,602	+		Rv3202c	0.50	+2.1
3,578,602	+		Rv3202c	0.50	-3.6
3,579,479	-		Rv3202c	0.77	-3.3
3,579,849	+		Rv3202c	0.89	-2.0
3,579,849	+		Rv3202c	0.89	-4.4
3,579,849	+		Rv3202c	0.89	-1.2
3,579,905	+				-2.6
3,579,905	+				-1.8
3,579,905	+				-0.3
3,579,911	+				-2.9
3,579,911	+				-0.9
3,579,912	-				-3.5
3,579,912	-				-1.0
3,579,912	-				-1.2
3,579,928	+				-2.5
3,580,110	+				-1.7
3,580,191	+				-2.6
3,580,191	+				-5.8
3,580,191	+				-3.2
3,580,191	+				-0.9
3,580,200	+				-0.5
3,580,299	+				-0.9
3,580,324	-				+0.1
3,580,394	+				-0.5
3,580,493	+				-0.2
3,580,494	-				-0.8
3,580,545	+				-1.6
3,580,545	+				+2.1
3,580,683	-				+0.2
3,580,683	-				-0.4
3,580,805	+		Rv3203	0.25	-0.8
3,580,806	-		Rv3203	0.25	+0.5
3,581,166	+		Rv3203	0.78	+1.4
3,581,166	+		Rv3203	0.78	-0.7