Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv3201c

Experiment: 7H9 with Levofloxacin 0.3 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Levofloxacin 0.3 ug/mL
3,573,160	+		Rv3200c	0.52	+0.1
3,573,226	-		Rv3200c	0.58	-2.7
3,573,226	-		Rv3200c	0.58	-2.3
3,573,428	+		Rv3200c	0.77	+0.0
3,573,429	-		Rv3200c	0.77	-1.7
3,573,429	-		Rv3200c	0.77	+2.1
3,573,495	-		Rv3200c	0.84	-1.0
3,573,661	-				+0.2
3,573,724	-				-0.5
3,573,767	+				-0.9
3,573,768	-				-1.2
3,573,768	-				-1.3
3,573,795	-				-2.4
3,573,832	-				-2.0
3,573,834	+				-3.1
3,573,834	+				+0.5
3,573,834	+				-2.1
3,573,835	-				-2.0
3,573,835	-				-0.5
3,573,844	+				-2.9
3,573,844	+				-3.1
3,573,895	-				+1.1
3,574,195	-		Rv3201c	0.14	-0.2
3,574,759	+		Rv3201c	0.31	-2.8
3,575,127	+		Rv3201c	0.42	+2.1
3,575,128	-		Rv3201c	0.42	-1.7
3,575,300	+		Rv3201c	0.47	+0.3
3,575,304	-		Rv3201c	0.48	-1.6
3,575,660	+		Rv3201c	0.58	-0.9
3,575,661	-		Rv3201c	0.58	-0.4
3,575,661	-		Rv3201c	0.58	+0.1
3,575,940	-		Rv3201c	0.67	-2.4
3,575,940	-		Rv3201c	0.67	+0.1
3,576,024	-		Rv3201c	0.69	-1.0
3,576,081	+		Rv3201c	0.71	-3.1
3,576,082	-		Rv3201c	0.71	-0.4
3,576,189	+		Rv3201c	0.74	-3.7
3,576,189	+		Rv3201c	0.74	+1.8
3,576,189	+		Rv3201c	0.74	-3.3
3,576,415	-		Rv3201c	0.81	-1.3
3,576,672	-		Rv3201c	0.89	+3.1
3,576,694	-		Rv3201c	0.90	-1.4
3,576,993	-				+0.6
3,577,238	+				-2.0
3,577,238	+				+1.6
3,577,238	+				-0.4
3,577,239	-				+2.1
3,577,304	+				-3.5
3,577,531	+		Rv3202c	0.16	-1.3
3,577,973	-		Rv3202c	0.30	-2.2