Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv3114
Experiment: 7H9 with Levofloxacin 0.3 ug/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | 7H9 with Levofloxacin 0.3 ug/mL |
---|---|---|---|---|---|
remove | |||||
3,480,719 | + | -0.7 | |||
3,480,753 | - | -0.5 | |||
3,480,931 | - | Rv3114 | 0.32 | -1.0 | |
3,481,305 | - | +0.9 | |||
3,481,330 | - | -0.3 |
Or see this region's nucleotide sequence