Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv2496c

Experiment: 7H9 with Levofloxacin 0.3 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Levofloxacin 0.3 ug/mL
2,810,253	+		Rv2496c	0.30	-0.3
2,810,408	+		Rv2496c	0.45	-1.6
2,810,510	+		Rv2496c	0.55	-1.5
2,810,510	+		Rv2496c	0.55	+2.2
2,810,550	+		Rv2496c	0.59	-2.2
2,810,701	+		Rv2496c	0.73	-1.2
2,810,701	+		Rv2496c	0.73	+3.2
2,810,779	-		Rv2496c	0.81	-1.4
2,810,874	-		Rv2496c	0.90	-0.3
2,811,063	+				+0.2
2,811,122	+		Rv2497c	0.12	-1.2
2,811,198	-		Rv2497c	0.19	-0.2
2,811,198	-		Rv2497c	0.19	-0.7
2,811,202	-		Rv2497c	0.19	-0.3
2,811,306	+		Rv2497c	0.28	-0.4
2,811,379	-		Rv2497c	0.35	-0.2
2,811,511	-		Rv2497c	0.47	-1.1
2,811,561	-		Rv2497c	0.51	+1.5
2,811,561	-		Rv2497c	0.51	-0.1
2,811,776	+		Rv2497c	0.71	-0.5
2,811,827	+		Rv2497c	0.76	+3.2
2,811,828	-		Rv2497c	0.76	-3.0
2,811,879	+		Rv2497c	0.80	+1.7
2,811,880	-		Rv2497c	0.80	+1.5
2,811,954	+		Rv2497c	0.87	+2.6