Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv2099c

Experiment: 7H9 with Levofloxacin 0.3 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Levofloxacin 0.3 ug/mL
2,357,137	-		Rv2098c	0.31	-0.0
2,357,186	+		Rv2098c	0.35	+0.0
2,357,187	-		Rv2098c	0.35	-0.4
2,357,224	-		Rv2098c	0.38	-1.0
2,357,224	-		Rv2098c	0.38	+1.0
2,357,224	-		Rv2098c	0.38	-0.3
2,357,224	-		Rv2098c	0.38	+0.8
2,357,227	+		Rv2098c	0.38	-0.8
2,357,228	-		Rv2098c	0.38	+0.7
2,357,364	+		Rv2098c	0.49	-2.1
2,357,415	-		Rv2098c	0.53	-0.2
2,357,948	+				-2.1
2,357,948	+				-1.2
2,357,949	-				-0.0
2,358,024	-				+0.5
2,358,045	+				-1.2
2,358,153	+		Rv2099c	0.69	-1.5
2,358,154	-		Rv2099c	0.70	-0.4
2,358,261	+				+0.5
2,358,262	-				-1.7
2,358,272	+				+0.0
2,358,272	+				+0.2
2,358,272	+				-0.2
2,358,273	-				+0.6
2,358,273	-				-0.2
2,358,278	-				+0.2
2,358,490	+				-0.9
2,358,728	-		Rv2100	0.21	-1.4
2,358,857	+		Rv2100	0.28	+1.0
2,359,010	-		Rv2100	0.38	+2.4
2,359,010	-		Rv2100	0.38	-0.1
2,359,032	+		Rv2100	0.39	-0.5
2,359,032	+		Rv2100	0.39	-0.1
2,359,032	+		Rv2100	0.39	+0.7
2,359,032	+		Rv2100	0.39	+1.6
2,359,033	-		Rv2100	0.39	-0.1
2,359,033	-		Rv2100	0.39	-1.3
2,359,033	-		Rv2100	0.39	+1.4
2,359,088	+		Rv2100	0.42	+0.0
2,359,089	-		Rv2100	0.42	+1.0
2,359,089	-		Rv2100	0.42	+1.4
2,359,089	-		Rv2100	0.42	-1.1
2,359,089	-		Rv2100	0.42	-0.9