Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv2095c

Experiment: 7H9 with Levofloxacin 0.3 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Levofloxacin 0.3 ug/mL
2,353,329	-				-0.4
2,353,388	-				-2.2
2,353,388	-				-2.4
2,353,388	-				-2.3
2,353,388	-				-1.3
2,353,479	+		Rv2095c	0.12	-1.7
2,353,479	+		Rv2095c	0.12	-2.7
2,353,479	+		Rv2095c	0.12	+0.8
2,353,507	+		Rv2095c	0.15	-2.0
2,353,508	-		Rv2095c	0.15	-3.3
2,353,508	-		Rv2095c	0.15	-1.9
2,353,508	-		Rv2095c	0.15	-0.5
2,353,508	-		Rv2095c	0.15	-1.5
2,353,548	+		Rv2095c	0.19	-2.8
2,353,548	+		Rv2095c	0.19	-1.8
2,353,548	+		Rv2095c	0.19	-3.6
2,353,548	+		Rv2095c	0.19	+1.4
2,353,549	-		Rv2095c	0.19	-2.2
2,353,567	+		Rv2095c	0.21	-2.2
2,353,568	-		Rv2095c	0.21	-1.5
2,353,568	-		Rv2095c	0.21	-2.3
2,353,771	+		Rv2095c	0.43	-3.6
2,353,771	+		Rv2095c	0.43	-1.7
2,353,771	+		Rv2095c	0.43	-1.2
2,353,772	-		Rv2095c	0.43	-2.5
2,353,772	-		Rv2095c	0.43	-0.6
2,353,846	+		Rv2095c	0.51	-1.8
2,353,846	+		Rv2095c	0.51	-1.9
2,354,071	-		Rv2095c	0.74	+0.6
2,354,266	+				-2.2
2,354,266	+				-1.8
2,354,541	-		Rv2096c	0.23	-3.4
2,354,597	+		Rv2096c	0.29	-1.3
2,354,597	+		Rv2096c	0.29	+2.4
2,354,598	-		Rv2096c	0.29	-2.1
2,354,719	-		Rv2096c	0.41	-0.8
2,354,719	-		Rv2096c	0.41	+0.8
2,354,773	-		Rv2096c	0.46	+1.4
2,354,773	-		Rv2096c	0.46	+0.0
2,355,207	+		Rv2096c	0.90	+1.4
2,355,270	-				-1.5