Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv1824

Experiment: 7H9 with Levofloxacin 0.3 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Levofloxacin 0.3 ug/mL
2,069,814	+		Rv1823	0.12	+0.4
2,070,160	+		Rv1823	0.50	-0.8
2,070,161	-		Rv1823	0.50	-0.7
2,070,430	+		Rv1823	0.79	-0.6
2,070,438	-		Rv1823	0.80	-1.4
2,070,530	+		Rv1823	0.90	-1.6
2,070,531	-		Rv1823	0.90	+2.4
2,070,623	+				-1.6
2,070,645	+				-0.9
2,070,769	-		Rv1824	0.31	-1.3
2,070,769	-		Rv1824	0.31	-3.2
2,071,287	-		Rv1825	0.29	+2.4
2,071,349	+		Rv1825	0.36	-0.3
2,071,350	-		Rv1825	0.36	-0.4
2,071,350	-		Rv1825	0.36	+0.7
2,071,350	-		Rv1825	0.36	+1.4
2,071,466	+		Rv1825	0.49	-1.7
2,071,483	-		Rv1825	0.51	+0.1
2,071,483	-		Rv1825	0.51	+0.1
2,071,545	-		Rv1825	0.58	-1.5
2,071,571	+		Rv1825	0.61	-1.7
2,071,894	+				-0.1
2,071,894	+				-0.7
2,071,894	+				-1.3