Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv1109c

Experiment: 7H9 with Levofloxacin 0.3 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Levofloxacin 0.3 ug/mL
1,235,312	-		Rv1108c	0.88	-1.5
1,235,312	-		Rv1108c	0.88	-1.6
1,235,312	-		Rv1108c	0.88	+1.3
1,235,533	+		Rv1109c	0.12	-2.5
1,235,749	+		Rv1109c	0.46	-0.3
1,235,749	+		Rv1109c	0.46	-2.0
1,235,750	-		Rv1109c	0.46	+0.3
1,236,002	-		Rv1109c	0.85	-1.7
1,236,067	-				-1.1
1,236,067	-				-0.6
1,236,079	+				-0.9
1,236,089	+				-0.7
1,236,089	+				+1.3
1,236,172	+				+0.1