Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv1075c

Experiment: 7H9 with Levofloxacin 0.3 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Levofloxacin 0.3 ug/mL
1,198,537	+		Rv1074c	0.31	-1.2
1,198,537	+		Rv1074c	0.31	-0.5
1,198,538	-		Rv1074c	0.31	-0.0
1,198,866	+		Rv1074c	0.58	-0.7
1,198,867	-		Rv1074c	0.58	-0.7
1,198,868	+		Rv1074c	0.58	-0.7
1,198,868	+		Rv1074c	0.58	-1.2
1,198,868	+		Rv1074c	0.58	-0.2
1,198,868	+		Rv1074c	0.58	-0.2
1,198,868	+		Rv1074c	0.58	-0.3
1,198,868	+		Rv1074c	0.58	-0.5
1,198,868	+		Rv1074c	0.58	+1.2
1,198,868	+		Rv1074c	0.58	+3.2
1,198,868	+		Rv1074c	0.58	-0.8
1,198,868	+		Rv1074c	0.58	-0.3
1,198,869	-		Rv1074c	0.59	-0.0
1,198,869	-		Rv1074c	0.59	+1.0
1,198,869	-		Rv1074c	0.59	+0.5
1,198,869	-		Rv1074c	0.59	+0.6
1,198,869	-		Rv1074c	0.59	+1.3
1,198,869	-		Rv1074c	0.59	+0.3
1,198,869	-		Rv1074c	0.59	+1.0
1,198,869	-		Rv1074c	0.59	+0.0
1,198,869	-		Rv1074c	0.59	+0.4
1,198,869	-		Rv1074c	0.59	-0.1
1,198,869	-		Rv1074c	0.59	+0.8
1,198,869	-		Rv1074c	0.59	-1.1
1,199,420	+				-1.0
1,199,613	+		Rv1075c	0.20	-0.2
1,199,687	+		Rv1075c	0.28	+0.9
1,199,687	+		Rv1075c	0.28	-0.0
1,199,688	-		Rv1075c	0.28	-0.0
1,199,688	-		Rv1075c	0.28	+0.2
1,199,688	-		Rv1075c	0.28	+0.9
1,199,688	-		Rv1075c	0.28	-0.1
1,199,868	-		Rv1075c	0.47	+0.5
1,199,919	-		Rv1075c	0.52	+0.4
1,199,919	-		Rv1075c	0.52	+0.0
1,200,210	+		Rv1075c	0.83	-1.2
1,200,210	+		Rv1075c	0.83	-0.0
1,200,210	+		Rv1075c	0.83	-1.0
1,200,211	-		Rv1075c	0.83	+0.3
1,200,212	+		Rv1075c	0.83	+0.7
1,200,212	+		Rv1075c	0.83	+0.9
1,200,254	+		Rv1075c	0.88	+0.2
1,200,306	+				+0.6
1,200,491	-				+0.1
1,200,608	-				-1.2
1,200,877	-		Rv1076	0.12	-0.7
1,200,877	-		Rv1076	0.12	+1.1
1,200,898	+		Rv1076	0.15	+2.5
1,200,898	+		Rv1076	0.15	+0.2
1,200,899	-		Rv1076	0.15	+0.2
1,200,899	-		Rv1076	0.15	+3.9
1,200,899	-		Rv1076	0.15	-0.3
1,200,899	-		Rv1076	0.15	+2.3
1,200,899	-		Rv1076	0.15	+1.9
1,201,152	-		Rv1076	0.43	+0.7