Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv0989c

Experiment: 7H9 with Levofloxacin 0.3 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Levofloxacin 0.3 ug/mL
1,105,473	+		Rv0988	0.31	-0.4
1,105,475	+		Rv0988	0.31	-0.8
1,106,256	+				-0.5
1,106,256	+				-0.5
1,106,360	+				-0.6
1,106,360	+				-0.6
1,106,361	-				-0.4
1,106,476	-				-2.4
1,106,476	-				-1.4
1,106,505	+		Rv0989c	0.10	-3.2
1,106,505	+		Rv0989c	0.10	-1.0
1,106,534	+		Rv0989c	0.13	-1.2
1,106,534	+		Rv0989c	0.13	-0.6
1,106,535	-		Rv0989c	0.13	-0.9
1,106,701	+		Rv0989c	0.30	-1.2
1,106,702	-		Rv0989c	0.30	-0.2
1,106,778	-		Rv0989c	0.38	-0.3
1,106,877	+		Rv0989c	0.48	+0.9
1,106,877	+		Rv0989c	0.48	-0.0
1,106,996	+		Rv0989c	0.60	-1.9
1,106,996	+		Rv0989c	0.60	-1.7
1,106,997	-		Rv0989c	0.61	-1.0
1,106,997	-		Rv0989c	0.61	-0.4
1,106,997	-		Rv0989c	0.61	-1.6
1,107,021	+		Rv0989c	0.63	-0.6
1,107,070	+		Rv0989c	0.68	-0.8
1,107,070	+		Rv0989c	0.68	+1.0
1,107,070	+		Rv0989c	0.68	-2.3
1,107,070	+		Rv0989c	0.68	+1.2
1,107,071	-		Rv0989c	0.68	-1.6
1,107,224	-		Rv0989c	0.84	-1.6
1,107,271	+		Rv0989c	0.89	-1.5
1,107,394	+				-1.4
1,107,421	+				-1.8
1,107,433	+				-2.7
1,107,433	+				-0.8
1,107,433	+				-0.6
1,107,433	+				+0.3
1,107,434	-				+1.2
1,107,434	-				-1.3
1,107,489	-				+4.2
1,107,493	+				+3.2
1,107,493	+				-0.6
1,107,494	-				-0.3
1,107,494	-				-1.5
1,107,538	+		Rv0990c	0.14	-1.4
1,108,348	-		Rv0991c	0.53	-0.4