Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv0963c

Experiment: 7H9 with Levofloxacin 0.3 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Levofloxacin 0.3 ug/mL
1,074,392	+				-0.8
1,074,393	-				-0.8
1,074,393	-				+0.8
1,074,445	-				+0.1
1,074,478	-				-2.6
1,074,478	-				-0.9
1,074,576	+		Rv0962c	0.20	-0.3
1,074,576	+		Rv0962c	0.20	+0.2
1,074,577	-		Rv0962c	0.20	-0.9
1,074,577	-		Rv0962c	0.20	-0.1
1,074,577	-		Rv0962c	0.20	+0.3
1,074,582	+		Rv0962c	0.21	-0.9
1,074,620	+		Rv0962c	0.27	-0.3
1,074,791	+		Rv0962c	0.52	-1.5
1,074,791	+		Rv0962c	0.52	-1.1
1,074,791	+		Rv0962c	0.52	-0.6
1,075,036	+		Rv0962c	0.88	-2.2
1,075,036	+		Rv0962c	0.88	-1.7
1,075,037	-		Rv0962c	0.88	+1.2
1,075,049	-				-0.3
1,075,122	-				-0.8
1,075,136	-				+0.6
1,075,241	+				-0.7
1,075,275	+				-0.9
1,075,298	+				-0.1
1,075,298	+				-0.1
1,075,425	+		Rv0963c	0.16	+0.6
1,075,425	+		Rv0963c	0.16	-0.8
1,075,425	+		Rv0963c	0.16	+2.2
1,075,457	+		Rv0963c	0.20	-0.8
1,075,458	-		Rv0963c	0.20	+0.4
1,075,523	+		Rv0963c	0.28	-1.0
1,075,524	-		Rv0963c	0.28	-1.3
1,075,728	-		Rv0963c	0.54	-0.1
1,075,760	+		Rv0963c	0.58	+1.2
1,075,761	-		Rv0963c	0.58	+0.2
1,075,993	-		Rv0963c	0.87	+0.5
1,076,474	-		Rv0964c	0.58	-0.1
1,076,520	+		Rv0964c	0.67	-1.1
1,076,521	-		Rv0964c	0.67	+1.2
1,076,631	+				-0.3
1,076,632	-				+1.6
1,076,784	-				+0.6
1,076,784	-				-0.6
1,076,899	+		Rv0965c	0.29	+0.7
1,076,899	+		Rv0965c	0.29	-1.3