Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv0930

Experiment: 7H9 with Levofloxacin 0.3 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Levofloxacin 0.3 ug/mL
1,036,364	+		Rv0929	0.34	-1.8
1,036,364	+		Rv0929	0.34	-0.4
1,036,617	+		Rv0929	0.60	-1.6
1,036,675	-		Rv0929	0.66	-0.4
1,036,719	-		Rv0929	0.71	+0.6
1,036,850	-		Rv0929	0.84	-1.3
1,036,914	-				-0.1
1,036,914	-				-0.1
1,037,065	-				-1.3
1,037,254	+		Rv0930	0.28	-1.4
1,037,255	-		Rv0930	0.28	-1.3
1,037,266	+		Rv0930	0.29	-1.3
1,037,335	+		Rv0930	0.36	-1.4
1,037,335	+		Rv0930	0.36	-2.5
1,037,336	-		Rv0930	0.36	-0.5
1,037,377	-		Rv0930	0.41	-0.7
1,037,412	+		Rv0930	0.45	-0.8
1,037,427	-		Rv0930	0.46	+2.2
1,037,779	+		Rv0930	0.84	-2.2
1,037,780	-		Rv0930	0.84	-0.9
1,037,966	+				-0.5
1,037,966	+				+0.1
1,037,966	+				+0.6
1,038,092	+				-0.9
1,038,092	+				-0.2
1,038,093	-				-1.6
1,038,219	-		Rv0931c	0.15	-0.1
1,038,344	+		Rv0931c	0.21	+0.2
1,038,344	+		Rv0931c	0.21	+1.2
1,038,344	+		Rv0931c	0.21	-1.7
1,038,345	-		Rv0931c	0.21	+2.2
1,038,345	-		Rv0931c	0.21	+0.6
1,038,345	-		Rv0931c	0.21	-1.0
1,038,384	-		Rv0931c	0.23	+1.3
1,038,384	-		Rv0931c	0.23	-0.3
1,038,467	+		Rv0931c	0.27	-0.2
1,038,467	+		Rv0931c	0.27	-0.9
1,038,467	+		Rv0931c	0.27	-0.3
1,038,468	-		Rv0931c	0.27	-0.8
1,038,468	-		Rv0931c	0.27	-0.3
1,038,468	-		Rv0931c	0.27	-2.3
1,038,468	-		Rv0931c	0.27	+2.2
1,038,468	-		Rv0931c	0.27	+1.2
1,038,469	+		Rv0931c	0.28	-0.9
1,038,510	-		Rv0931c	0.30	-1.3
1,038,576	-		Rv0931c	0.33	+0.7
1,038,576	-		Rv0931c	0.33	+0.9
1,038,576	-		Rv0931c	0.33	+0.4
1,038,597	-		Rv0931c	0.34	-1.8
1,038,597	-		Rv0931c	0.34	-0.7
1,038,710	-		Rv0931c	0.40	-2.5