Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv0007

Experiment: 7H9 with Levofloxacin 0.3 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Levofloxacin 0.3 ug/mL
9,817	-				+0.4
9,877	+				+0.1
9,877	+				-2.0
9,878	-				-0.5
9,878	-				-1.4
9,878	-				-1.3
10,278	-		Rv0007	0.40	-1.5
11,289	+				-0.5
11,290	-				+0.5
11,422	+				-2.0
11,422	+				-0.7
11,557	-				-0.6
11,619	-				-2.1
11,675	+				-0.4
11,675	+				+0.1
11,675	+				-0.3
11,675	+				-0.1
11,675	+				-0.5
11,676	-				-0.2
11,676	-				+0.1
11,679	+				+0.0
11,680	-				+3.3
11,733	+				-0.4
11,733	+				-0.2
11,743	+				-0.9
11,743	+				-0.4
11,744	-				-1.5