Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv3427c
Experiment: 7H9 with Moxifloxacin 0.121 ug/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | 7H9 with Moxifloxacin 0.121 ug/mL |
---|---|---|---|---|---|
remove | |||||
3,842,894 | + | -0.6 | |||
3,842,894 | + | -2.3 | |||
3,843,206 | + | Rv3426 | 0.24 | -0.9 | |
3,843,491 | - | Rv3426 | 0.65 | +1.8 | |
3,843,804 | + | +0.4 | |||
3,843,805 | - | +0.8 | |||
3,843,805 | - | -0.7 | |||
3,843,829 | + | -1.0 | |||
3,843,830 | - | -0.3 | |||
3,843,856 | + | -0.6 | |||
3,843,863 | + | -0.6 | |||
3,843,886 | + | -0.9 | |||
3,843,887 | - | -0.1 | |||
3,844,455 | + | Rv3427c | 0.75 | -1.0 | |
3,844,602 | - | +0.5 | |||
3,844,606 | - | +1.1 | |||
3,844,635 | - | +0.4 | |||
3,845,360 | - | Rv3428c | 0.50 | -0.1 | |
3,845,491 | - | Rv3428c | 0.61 | -0.1 |
Or see this region's nucleotide sequence