Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv2627c
Experiment: 7H9 with Moxifloxacin 0.121 ug/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | 7H9 with Moxifloxacin 0.121 ug/mL |
|---|---|---|---|---|---|
| remove | |||||
| 2,952,759 | - | Rv2626c | 0.46 | -0.3 | |
| 2,952,914 | + | Rv2626c | 0.81 | -2.0 | |
| 2,952,914 | + | Rv2626c | 0.81 | -0.3 | |
| 2,953,020 | - | -2.3 | |||
| 2,953,066 | - | +2.9 | |||
| 2,953,106 | - | -0.7 | |||
| 2,953,201 | + | +0.1 | |||
| 2,953,201 | + | -2.0 | |||
| 2,953,373 | + | +0.7 | |||
| 2,953,746 | + | Rv2627c | 0.19 | -0.3 | |
| 2,953,925 | + | Rv2627c | 0.34 | +0.9 | |
| 2,953,926 | - | Rv2627c | 0.34 | -1.0 | |
| 2,954,207 | - | Rv2627c | 0.56 | +1.1 | |
| 2,954,246 | - | Rv2627c | 0.60 | +1.0 | |
| 2,954,256 | - | Rv2627c | 0.60 | +1.1 | |
| 2,954,276 | + | Rv2627c | 0.62 | -0.1 | |
| 2,954,277 | - | Rv2627c | 0.62 | -0.7 | |
| 2,954,577 | + | Rv2627c | 0.86 | +1.3 | |
| 2,954,646 | - | -1.9 | |||
| 2,954,791 | + | +0.1 | |||
| 2,954,791 | + | -0.2 | |||
| 2,955,418 | + | -1.5 | |||
| 2,955,430 | - | -0.8 | |||
| 2,955,430 | - | +0.5 | |||
| 2,955,483 | + | +2.3 | |||
| 2,955,483 | + | +0.3 | |||
| 2,955,581 | - | -0.4 | |||
| 2,955,589 | - | -0.3 | |||
| 2,955,643 | - | -2.5 | |||
| 2,955,726 | + | -0.5 | |||
| 2,955,727 | - | +0.3 | |||
| 2,955,739 | - | +3.3 |
Or see this region's nucleotide sequence