Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv1820

Experiment: 7H9 with Moxifloxacin 0.121 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Moxifloxacin 0.121 ug/mL
2,063,799	-		Rv1819c	0.52	+0.1
2,063,959	+		Rv1819c	0.60	+1.0
2,063,960	-		Rv1819c	0.60	-1.2
2,063,960	-		Rv1819c	0.60	-0.8
2,064,008	+		Rv1819c	0.62	+1.4
2,064,214	+		Rv1819c	0.73	+2.1
2,064,217	+		Rv1819c	0.73	-0.3
2,064,217	+		Rv1819c	0.73	-0.0
2,064,217	+		Rv1819c	0.73	-2.5
2,064,217	+		Rv1819c	0.73	-0.2
2,064,218	-		Rv1819c	0.73	+0.7
2,064,218	-		Rv1819c	0.73	+1.5
2,064,218	-		Rv1819c	0.73	+1.3
2,064,298	+		Rv1819c	0.78	-0.7
2,064,299	-		Rv1819c	0.78	-0.5
2,064,299	-		Rv1819c	0.78	-0.2
2,064,299	-		Rv1819c	0.78	-1.0
2,064,442	+		Rv1819c	0.85	-2.0
2,064,442	+		Rv1819c	0.85	+2.5
2,064,442	+		Rv1819c	0.85	+2.5
2,064,442	+		Rv1819c	0.85	+0.9
2,064,442	+		Rv1819c	0.85	-0.7
2,064,443	-		Rv1819c	0.85	-0.1
2,064,443	-		Rv1819c	0.85	+1.2
2,064,443	-		Rv1819c	0.85	-0.0
2,064,443	-		Rv1819c	0.85	+1.7
2,064,443	-		Rv1819c	0.85	+0.9
2,064,443	-		Rv1819c	0.85	-0.9
2,064,468	+		Rv1819c	0.86	+1.9
2,064,468	+		Rv1819c	0.86	+1.3
2,064,468	+		Rv1819c	0.86	-2.1
2,064,469	-		Rv1819c	0.86	-0.9
2,064,556	+				-0.9
2,064,557	-				-0.1
2,064,557	-				-0.8
2,064,667	+				+0.2
2,064,668	-				-1.9
2,064,668	-				-0.0
2,064,771	-				+0.2
2,064,788	-				+0.4
2,064,847	-				-0.6
2,064,862	-				-0.5
2,064,920	-				+0.7
2,065,143	+		Rv1820	0.21	-0.1
2,065,206	+		Rv1820	0.25	-1.7
2,065,361	+		Rv1820	0.34	+1.2
2,065,362	-		Rv1820	0.34	+2.9
2,065,449	+		Rv1820	0.40	-1.3
2,065,449	+		Rv1820	0.40	-0.1
2,065,449	+		Rv1820	0.40	-0.3
2,065,450	-		Rv1820	0.40	-1.1
2,065,450	-		Rv1820	0.40	+1.5
2,065,450	-		Rv1820	0.40	-0.1
2,065,744	+		Rv1820	0.57	+0.6
2,065,745	-		Rv1820	0.58	-1.1
2,065,903	+		Rv1820	0.67	-0.1
2,065,903	+		Rv1820	0.67	-0.7
2,065,904	-		Rv1820	0.67	+1.7
2,065,904	-		Rv1820	0.67	+0.3
2,065,940	+		Rv1820	0.69	-0.8
2,065,940	+		Rv1820	0.69	-0.1
2,065,941	-		Rv1820	0.69	+0.1
2,065,973	-		Rv1820	0.71	-1.6
2,065,973	-		Rv1820	0.71	+0.5
2,065,973	-		Rv1820	0.71	-0.4
2,065,996	+		Rv1820	0.73	+0.3
2,065,996	+		Rv1820	0.73	+0.2
2,065,996	+		Rv1820	0.73	-1.3
2,065,997	-		Rv1820	0.73	+0.3
2,065,997	-		Rv1820	0.73	-1.1
2,065,997	-		Rv1820	0.73	-0.3
2,065,997	-		Rv1820	0.73	-0.3
2,066,236	+		Rv1820	0.87	+0.2
2,066,236	+		Rv1820	0.87	+2.5
2,066,236	+		Rv1820	0.87	-0.2
2,066,236	+		Rv1820	0.87	+1.5
2,066,237	-		Rv1820	0.87	-0.3
2,066,237	-		Rv1820	0.87	-0.3
2,066,417	-				-0.4
2,066,498	+				-0.2
2,066,536	-				-0.1
2,066,651	-				-1.4
2,066,960	+		Rv1821	0.21	+1.5
2,066,967	+		Rv1821	0.21	-0.1
2,067,093	+		Rv1821	0.26	-1.5
2,067,093	+		Rv1821	0.26	-1.5
2,067,093	+		Rv1821	0.26	-1.9
2,067,124	+		Rv1821	0.27	-0.3
2,067,125	-		Rv1821	0.28	+1.5
2,067,327	+		Rv1821	0.36	+0.5