Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv1530
Experiment: 7H9 with Moxifloxacin 0.121 ug/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | 7H9 with Moxifloxacin 0.121 ug/mL |
---|---|---|---|---|---|
remove | |||||
1,730,525 | + | Rv1529 | 0.58 | -1.5 | |
1,730,664 | + | Rv1529 | 0.66 | +1.4 | |
1,730,968 | - | Rv1529 | 0.84 | +0.3 | |
1,731,473 | + | -0.2 | |||
1,731,521 | - | Rv1530 | 0.13 | +2.4 | |
1,731,554 | + | Rv1530 | 0.16 | +1.6 | |
1,731,555 | - | Rv1530 | 0.16 | -0.6 | |
1,731,650 | + | Rv1530 | 0.25 | -0.6 | |
1,731,651 | - | Rv1530 | 0.25 | +0.4 | |
1,731,784 | + | Rv1530 | 0.37 | +0.1 | |
1,731,784 | + | Rv1530 | 0.37 | -0.4 | |
1,731,878 | + | Rv1530 | 0.46 | +0.3 | |
1,732,420 | - | +0.1 | |||
1,732,707 | + | Rv1531 | 0.41 | +0.5 | |
1,732,791 | + | Rv1531 | 0.56 | +0.1 | |
1,732,939 | + | Rv1531 | 0.82 | +1.3 | |
1,733,118 | - | +2.4 |
Or see this region's nucleotide sequence