Experiment: 7H9 with Moxifloxacin 0.121 ug/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Rv1502 and Rv1503c are separated by 172 nucleotides Rv1503c and Rv1504c are separated by 0 nucleotides Rv1504c and Rv1505c are separated by 136 nucleotides
Rv1502: Rv1502 - Hypothetical protein, at 1,692,924 to 1,693,823
Rv1502
Rv1503c: Rv1503c - Conserved hypothetical protein, at 1,693,996 to 1,694,544
Rv1503c
Rv1504c: Rv1504c - Conserved hypothetical protein, at 1,694,545 to 1,695,144
Rv1504c
Rv1505c: Rv1505c - Conserved hypothetical protein, at 1,695,281 to 1,695,946
Rv1505c
Position (kb)
1693
1694
1695 Strain fitness (log2 ratio)
-1
0
1 at 1693.399 kb on - strand, within Rv1502 at 1693.411 kb on - strand, within Rv1502 at 1693.840 kb on - strand at 1693.992 kb on - strand at 1694.050 kb on + strand at 1694.051 kb on - strand, within Rv1503c at 1694.194 kb on - strand, within Rv1503c at 1694.245 kb on + strand, within Rv1503c at 1694.246 kb on - strand, within Rv1503c at 1694.246 kb on - strand, within Rv1503c at 1694.248 kb on + strand, within Rv1503c at 1694.248 kb on + strand, within Rv1503c at 1694.255 kb on + strand, within Rv1503c at 1694.258 kb on + strand, within Rv1503c at 1694.259 kb on - strand, within Rv1503c at 1694.259 kb on - strand, within Rv1503c at 1694.259 kb on - strand, within Rv1503c at 1694.259 kb on - strand, within Rv1503c at 1694.259 kb on - strand, within Rv1503c at 1694.546 kb on + strand at 1694.546 kb on + strand at 1694.651 kb on + strand, within Rv1504c at 1694.751 kb on - strand, within Rv1504c at 1694.751 kb on - strand, within Rv1504c at 1694.795 kb on - strand, within Rv1504c at 1694.897 kb on + strand, within Rv1504c at 1694.897 kb on + strand, within Rv1504c at 1694.898 kb on - strand, within Rv1504c at 1694.908 kb on + strand, within Rv1504c at 1694.909 kb on - strand, within Rv1504c at 1694.930 kb on - strand, within Rv1504c at 1694.930 kb on - strand, within Rv1504c at 1694.983 kb on + strand, within Rv1504c at 1694.983 kb on + strand, within Rv1504c at 1694.983 kb on + strand, within Rv1504c at 1694.983 kb on + strand, within Rv1504c at 1694.983 kb on + strand, within Rv1504c at 1694.984 kb on - strand, within Rv1504c at 1694.984 kb on - strand, within Rv1504c at 1695.087 kb on - strand at 1695.111 kb on - strand at 1695.275 kb on - strand at 1695.335 kb on + strand at 1695.336 kb on - strand at 1695.337 kb on + strand at 1695.340 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 7H9 with Moxifloxacin 0.121 ug/mL remove 1,693,399 - Rv1502 0.53 -0.3 1,693,411 - Rv1502 0.54 -0.1 1,693,840 - -1.1 1,693,992 - +0.8 1,694,050 + +1.1 1,694,051 - Rv1503c 0.10 +1.7 1,694,194 - Rv1503c 0.36 -0.2 1,694,245 + Rv1503c 0.45 +0.2 1,694,246 - Rv1503c 0.46 +0.6 1,694,246 - Rv1503c 0.46 +0.1 1,694,248 + Rv1503c 0.46 -0.8 1,694,248 + Rv1503c 0.46 +0.1 1,694,255 + Rv1503c 0.47 -0.0 1,694,258 + Rv1503c 0.48 +0.0 1,694,259 - Rv1503c 0.48 -0.3 1,694,259 - Rv1503c 0.48 +1.0 1,694,259 - Rv1503c 0.48 -0.4 1,694,259 - Rv1503c 0.48 +0.9 1,694,259 - Rv1503c 0.48 -0.4 1,694,546 + +0.7 1,694,546 + -0.8 1,694,651 + Rv1504c 0.18 -0.5 1,694,751 - Rv1504c 0.34 -1.2 1,694,751 - Rv1504c 0.34 -0.6 1,694,795 - Rv1504c 0.42 -0.4 1,694,897 + Rv1504c 0.59 +1.0 1,694,897 + Rv1504c 0.59 -0.1 1,694,898 - Rv1504c 0.59 -0.4 1,694,908 + Rv1504c 0.60 -0.9 1,694,909 - Rv1504c 0.61 -1.0 1,694,930 - Rv1504c 0.64 -0.1 1,694,930 - Rv1504c 0.64 +0.8 1,694,983 + Rv1504c 0.73 -0.1 1,694,983 + Rv1504c 0.73 -0.4 1,694,983 + Rv1504c 0.73 -1.2 1,694,983 + Rv1504c 0.73 -1.0 1,694,983 + Rv1504c 0.73 -0.8 1,694,984 - Rv1504c 0.73 -0.4 1,694,984 - Rv1504c 0.73 -0.9 1,695,087 - +0.4 1,695,111 - +0.3 1,695,275 - -1.0 1,695,335 + +0.2 1,695,336 - -0.9 1,695,337 + +0.7 1,695,340 - -0.4
Or see this region's nucleotide sequence