Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv3711c
Experiment: 7H9 with Moxifloxacin 0.121 ug/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | 7H9 with Moxifloxacin 0.121 ug/mL |
|---|---|---|---|---|---|
| remove | |||||
| 4,155,672 | + | -0.1 | |||
| 4,155,672 | + | -0.7 | |||
| 4,155,689 | - | -2.4 | |||
| 4,155,689 | - | -0.5 | |||
| 4,155,752 | + | -0.7 | |||
| 4,155,752 | + | +0.0 | |||
| 4,155,753 | - | +0.5 | |||
| 4,155,753 | - | -0.9 | |||
| 4,155,753 | - | -0.3 | |||
| 4,155,876 | + | Rv3711c | 0.14 | +1.5 | |
| 4,155,877 | - | Rv3711c | 0.14 | -0.1 | |
| 4,155,877 | - | Rv3711c | 0.14 | -0.1 | |
| 4,156,001 | + | Rv3711c | 0.26 | -0.1 | |
| 4,156,002 | - | Rv3711c | 0.26 | -0.5 | |
| 4,156,056 | + | Rv3711c | 0.32 | -0.3 | |
| 4,156,057 | - | Rv3711c | 0.32 | +0.3 | |
| 4,156,221 | - | Rv3711c | 0.49 | -0.1 | |
| 4,156,566 | - | Rv3711c | 0.83 | -1.0 | |
| 4,156,589 | + | Rv3711c | 0.86 | -0.3 | |
| 4,156,590 | - | Rv3711c | 0.86 | -1.6 | |
| 4,156,969 | + | -1.2 | |||
| 4,156,970 | - | +0.7 |
Or see this region's nucleotide sequence