Experiment: 7H9 with Moxifloxacin 0.121 ug/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Rv3671c and Rv3672c are separated by 5 nucleotides Rv3672c and Rv3673c are separated by 131 nucleotides Rv3673c and Rv3674c overlap by 1 nucleotides
Rv3671c: Rv3671c - Membrane-associated serine protease, at 4,112,322 to 4,113,515
Rv3671c
Rv3672c: Rv3672c - Conserved hypothetical protein, at 4,113,521 to 4,114,342
Rv3672c
Rv3673c: Rv3673c - Possible membrane-anchored thioredoxin-like protein (thiol-disulfide interchange related protein), at 4,114,474 to 4,115,157
Rv3673c
Rv3674c: Rv3674c - Probable endonuclease III Nth (DNA-(apurinic or apyrimidinic site)lyase) (AP lyase) (AP endonuclease class I) (endodeoxyribonuclease (apurinic or apyrimidinic)) (deoxyribonuclease (apurinic or apyrimidinic)), at 4,115,157 to 4,115,894
Rv3674c
Position (kb) 4113
4114
4115 Strain fitness (log2 ratio) -1
0
1 at 4114.041 kb on - strand, within Rv3672c at 4114.041 kb on - strand, within Rv3672c at 4114.218 kb on - strand, within Rv3672c at 4114.471 kb on + strand at 4115.158 kb on + strand at 4115.159 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 7H9 with Moxifloxacin 0.121 ug/mL remove 4,114,041 - Rv3672c 0.63 +0.5 4,114,041 - Rv3672c 0.63 -1.7 4,114,218 - Rv3672c 0.85 -0.1 4,114,471 + -0.7 4,115,158 + -0.6 4,115,159 - -0.3
Or see this region's nucleotide sequence