Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv3529c
Experiment: 7H9 with Moxifloxacin 0.121 ug/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | 7H9 with Moxifloxacin 0.121 ug/mL |
---|---|---|---|---|---|
remove | |||||
3,964,946 | + | Rv3528c | 0.65 | -0.7 | |
3,965,014 | - | Rv3528c | 0.75 | -1.8 | |
3,965,204 | + | +0.5 | |||
3,965,237 | - | -0.8 | |||
3,965,443 | + | +1.3 | |||
3,965,559 | - | -1.4 | |||
3,965,838 | + | -0.4 | |||
3,966,048 | + | Rv3529c | 0.14 | +0.7 | |
3,966,049 | - | Rv3529c | 0.14 | +1.0 | |
3,966,331 | + | Rv3529c | 0.39 | -0.2 | |
3,966,479 | + | Rv3529c | 0.52 | -0.4 | |
3,966,479 | + | Rv3529c | 0.52 | +0.6 | |
3,966,479 | + | Rv3529c | 0.52 | -0.2 | |
3,966,899 | + | Rv3529c | 0.88 | +0.4 | |
3,967,459 | - | Rv3530c | 0.54 | -1.0 | |
3,967,577 | - | Rv3530c | 0.69 | -0.4 | |
3,967,609 | - | Rv3530c | 0.73 | -0.3 | |
3,967,609 | - | Rv3530c | 0.73 | -0.0 | |
3,967,902 | + | -1.0 |
Or see this region's nucleotide sequence